Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme106346g00001 AAGGATGGATACGAATCTAAATTTATTGAGACTATTGTTAAGGAAGTCTATAGGAAGGTTTCTCGTGTTTCTTTACCCGTTGCTGATTATCCTGTTGGATTGGAGTCTCGAGTGTATAAAGTAATATCACTTCTGAATCTTGATTCTTATGATGTAGTCCATATGGTGGGCATCCACGGTATCGGTGGAATTGGTAAAACTACAATTGCTCGAGCAGTATATAATTCAATCAGTAACCAGTTTGATGGTCAGTGTTTTCTCGAGGATGTCAGAGAGAATTCAATGAAATTTGGGTTAGTACATCTTCAAAACATTGTTCTTTCTATGATATGTTGCGATGGGGATATTAACGTACAAAATGAAAAAGAAGGAATTTCAATGATAAGGCAGAGGCTCTGTCGAAAAAAGGTTTTATTGGTTCTTGACGATGTTAACAAAAAGGAGCAGTTTAAGGCTATTGCTGGAGCATCTAATTGGTTTGGTCCTGGCAGCAGAGTCATCATCACAACTCGGGACAACAATTTGCTACTAAGGCATTGGGATGGATTT 549 0.3789 KDGYESKFIETIVKEVYRKVSRVSLPVADYPVGLESRVYKVISLLNLDSYDVVHMVGIHGIGGIGKTTIARAVYNSISNQFDGQCFLEDVRENSMKFGLVHLQNIVLSMICCDGDINVQNEKEGISMIRQRLCRKKVLLVLDDVNKKEQFKAIAGASNWFGPGSRVIITTRDNNLLLRHWDGF 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme106346g00001 183 PRINTS Disease resistance protein signature 131 145 - -
Trme106346g00001 183 PRINTS Disease resistance protein signature 55 70 - -
Trme106346g00001 183 Gene3D - 11 179 IPR027417 -
Trme106346g00001 183 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 3 176 IPR044974 GO:0006952
Trme106346g00001 183 Pfam NB-ARC domain 38 175 IPR002182 GO:0043531
Trme106346g00001 183 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 23 178 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme106346g00001 Trme-Chr106346 121 669 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme106346g00001 32 176 WRKY Transcription Factor Family AT5G45050 33.333 2.68e-21 88.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme106346g00001 - - aip:110272157 207.608