Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme1062976g00001 ATGGTAGTACATGTATCAGAACCTAGAAATGCTCAAATGGAAACGCCAGAGATTTCACATTCTGATAAGAAATATCAACCAGCATCTCTACCTATTGATAAACCTGCAGATGATGGCTACAACTGGCGTAAGTATGGACAGAAGCAG 147 0.4014 MVVHVSEPRNAQMETPEISHSDKKYQPASLPIDKPADDGYNWRKYGQKQ 49
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme1062976g00001 49 MobiDBLite consensus disorder prediction 1 49 - -
Trme1062976g00001 49 Gene3D WRKY domain 10 49 IPR036576 GO:0003700|GO:0006355|GO:0043565
Trme1062976g00001 49 SUPERFAMILY WRKY DNA-binding domain 35 49 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme1062976g00001 Trme-Chr1062976 16 162 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme1062976g00001 5 49 WRKY Transcription Factor Family AT2G03340 60.000 1.40e-10 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme1062976g00001 - - mtr:11419447 94.3597