Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme106188g00001 ATGGACTTACTTGCTGTTCTTTCCACCACTCCATCCACACCTGCTCAAAATGGCGGCACCAAGTCCACAACTAGTGCTGATCAGATTAGAGAACAACAATTCACTTCAGTTGGCAGAGAAAGAAGCAGTGGTAGTTCTCAGTCTCCAAATGACGATTCAGATTGCCAGGAGGATGTTCGAGTTAATTTGCCATTGCAACTTTTTAACTCCTCTCCAGAAGATGACAGTCGGTCAAAATTGCCATCTTCGCGAAATTATTTTTCATCGGAAAGTAGTAACCCTGTGGACGAAAGGTCGCCGTCGTCGTCTCCTCCTGTTGTGGAAATGAATTTTGGTTTGCAAGGTGGGATTAGAGGTCTCAATTCTAATAGTATYAAGACTGGAATGGGAGTCAATGCAAATAAGGAAACTAGTCAAAGTCATAGTTGTACTACTATCCCTCTTGATCTCTTTAAAGGGTCAAAATCAAATAACATGATCCAACAAACTAGTTCAGTTCAAAGTGTTCCGTTTAAAGCTGGTTATGCATCTTCAGGCTCTGATTATTCACCTCCCAGTTTGAATTCAGATACTCAG 576 0.4149 MDLLAVLSTTPSTPAQNGGTKSTTSADQIREQQFTSVGRERSSGSSQSPNDDSDCQEDVRVNLPLQLFNSSPEDDSRSKLPSSRNYFSSESSNPVDERSPSSSPPVVEMNFGLQGGIRGLNSNSIKTGMGVNANKETSQSHSCTTIPLDLFKGSKSNNMIQQTSSVQSVPFKAGYASSGSDYSPPSLNSDTQ 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme106188g00001 192 MobiDBLite consensus disorder prediction 1 52 - -
Trme106188g00001 192 MobiDBLite consensus disorder prediction 1 107 - -
Trme106188g00001 192 MobiDBLite consensus disorder prediction 63 107 - -
Trme106188g00001 192 MobiDBLite consensus disorder prediction 161 192 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme106188g00001 Trme-Chr106188 40 615 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme106188g00001 1 192 SBP-box Gene Family AT1G20980 45.327 3.22e-26 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme106188g00001 - - gmx:100819004 231.106