Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Trme106139g00001 | ATCACACTTCTTAGAGATGCACCTGCTCTTGGCTTCTACTTTGGGACATATGAGTATGCGAGGGAGAAACTTCACCCTGGTTGTCGAGAAAGTTGTCAAGAAAATATGAGTACTATGTTTATAGCCGGAGGATTAGCAGGGATGGCGAGTTGGCTTTTCAACTACCCTACAGATGTTATAAAGACAAGATTGCAGGCTCAAACATCTTCTTCAATGAAATACAAAGGTGTGTTGGATTGCACCCTAAAGATAGTGAAAGAAGAAGGTTCTATTGTGCTATGGAGGGGCTTAGGAGCAACACTTGTTAGAGCATTTGTGATGAATAGTGCTATATTTCCTGTTTATCAGGTTGCTCTAAGGTGTTTGGCCAACAATTAA | 378 | 0.4101 | ITLLRDAPALGFYFGTYEYAREKLHPGCRESCQENMSTMFIAGGLAGMASWLFNYPTDVIKTRLQAQTSSSMKYKGVLDCTLKIVKEEGSIVLWRGLGATLVRAFVMNSAIFPVYQVALRCLANN | 125 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Trme106139g00001 | 125 | PANTHER | MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED | 2 | 122 | - | - | |
| Trme106139g00001 | 125 | SUPERFAMILY | Mitochondrial carrier | 2 | 115 | IPR023395 | - | |
| Trme106139g00001 | 125 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 34 | 121 | IPR018108 | - | |
| Trme106139g00001 | 125 | Pfam | Mitochondrial carrier protein | 36 | 124 | IPR018108 | - | |
| Trme106139g00001 | 125 | Gene3D | Mitochondrial carrier domain | 1 | 125 | IPR023395 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Trme106139g00001 | Trme-Chr106139 | 1 | 378 | Dispersed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Trme106139g00001 | 1 | 125 | Antiporters | AT1G79900 | 62.400 | 1.36e-52 | 166 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Trme106139g00001 | K15109 | - | gmx:100812034 | 188.734 |