Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme106063g00001 ATTGCAAAAGAAAATGATTCTATCTCCGAAGATATTATAAAGAATGCTGTTACTGCTACGGAGGATGGATTTATGACTCTTGTTCGAAGAAGCTTCGGAATAAAGCCACTGATAGCAGCAATGGGTTCTTGTTGTCTTGTTGGTGTTATCTGGAAAGGAACATTATATATCGCTAATCTTGGAGACTCTCGAGCTGTGATCGGTTCAACTGGTCGATCTAACAAGATCGTTGCTAAACAGTTGACCAAAGAGCACAATGCCTGCAAAGCAGATATCAGAAGAGAACTTAAGTCTTTGCATCCAGAAGATTCGCAAATTGTTGTTATGAAACATGGAACATGGCGCATTAAAGGCATCATCCAGGTTTTTATATCCTTTTCTCTTACGAAATAA 393 0.3868 IAKENDSISEDIIKNAVTATEDGFMTLVRRSFGIKPLIAAMGSCCLVGVIWKGTLYIANLGDSRAVIGSTGRSNKIVAKQLTKEHNACKADIRRELKSLHPEDSQIVVMKHGTWRIKGIIQVFISFSLTK 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme106063g00001 130 SUPERFAMILY PP2C-like 7 122 IPR036457 -
Trme106063g00001 130 ProSiteProfiles PPM-type phosphatase domain profile. 1 130 IPR001932 -
Trme106063g00001 130 PANTHER PROTEIN PHOSPHATASE 17 124 IPR015655 GO:0004722|GO:0006470
Trme106063g00001 130 Gene3D - 2 127 IPR036457 -
Trme106063g00001 130 Pfam Protein phosphatase 2C 10 121 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme106063g00001 Trme-Chr106063 192 584 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme106063g00001 1 122 PP2C-type Phosphatase Gene Family AT5G06750 67.460 1.79e-57 181