Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme106052g00001 GTTGCATCAGGGAAAGTGATATTACAAGAAAGACTTCACCAGAAGAAGATATTTCTTGTGCTTGACGATGTGAATAAAGTGGAGCAATTGAATGCTTTGTGCGGAAGTCACGAATGGTTTGGTCAAGGAAGCAGAATAATCATCACAACAAGAGATGATGATTTACTTGGTAAGCTTGAAGTTCACCATAGATATAGAATGAAAGAAATGGGTGACAATGAATCTCTTGAGCTTTTTAGTTGGCATTCATTCAAGCAACCAAATCCTGTCGAAGGTTTTGCTGACCTTTCTAGAGATGTTGTTAAGTACTCTGGAGGATTGCCACTGGCTCTTGAAGTCATTGGGTCCTTTTTGTTGACTAGGAAAAGGAAAACAGAGTGGAAGAGTGTATTGGAGAAACTGAAACTCATTCCCAATAGCAAAGTTTTAGAGAAGCTAAGAATAAGTTTTGATGGTTTAAGTGATGATGATGTGCAAGAAATATTCCTTGATATTGCTTTTTTCTTTATTGGGATGGACCAAGAAGATGTAACTTCGATATTGGAAGATTGTGGGTATTATGCAGTTACTGGAATAAGTGTCCTTGTACAACAAAGCCTTATAACCGTTGATCGGAAGAACAAGATTGGAATGCATGATTTGCTACGTGACATGGGAAGAGAGATTGTA 669 0.3782 VASGKVILQERLHQKKIFLVLDDVNKVEQLNALCGSHEWFGQGSRIIITTRDDDLLGKLEVHHRYRMKEMGDNESLELFSWHSFKQPNPVEGFADLSRDVVKYSGGLPLALEVIGSFLLTRKRKTEWKSVLEKLKLIPNSKVLEKLRISFDGLSDDDVQEIFLDIAFFFIGMDQEDVTSILEDCGYYAVTGISVLVQQSLITVDRKNKIGMHDLLRDMGREIV 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme106052g00001 223 Gene3D - 70 154 IPR042197 -
Trme106052g00001 223 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 4 223 IPR044974 GO:0006952
Trme106052g00001 223 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 5 165 IPR027417 -
Trme106052g00001 223 SUPERFAMILY "Winged helix" DNA-binding domain 140 223 IPR036390 -
Trme106052g00001 223 Pfam NB-ARC domain 8 135 IPR002182 GO:0043531
Trme106052g00001 223 Gene3D - 2 64 IPR027417 -
Trme106052g00001 223 PRINTS Disease resistance protein signature 11 25 - -
Trme106052g00001 223 PRINTS Disease resistance protein signature 104 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme106052g00001 Trme-Chr106052 1 669 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme106052g00001 2 223 WRKY Transcription Factor Family AT5G45050 36.283 5.67e-41 146
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme106052g00001 - - mtr:11408937 372.859