Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme1060105g00001 ATGTCTTCACCGACCACCGCACAAAGCAGTGTTCATCTAGACAAATTCTTTGAAGAAGTTGAAGGAGTTAAAGAGGAATTGAAGGAGCTAGATCGTCTATATGAAAACCTTCGAGCCTCCCATGAGAGGAGCAAGACCCTTCACAGCGCGAAATCTGTGAAG 162 0.4506 MSSPTTAQSSVHLDKFFEEVEGVKEELKELDRLYENLRASHERSKTLHSAKSVK 54
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme1060105g00001 54 Gene3D - 10 54 - -
Trme1060105g00001 54 Coils Coil 13 43 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme1060105g00001 Trme-Chr1060105 1 162 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme1060105g00001 1 54 SNARE and Associated Proteins AT3G11820 64.815 1.42e-18 74.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme1060105g00001 K08486 - gmx:100808718 68.5514