Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme1059621g00001 AGATTCTCTGATGCTTCCGTTCAGAGTGACATGAAGCTATGGCCATTCAAGGTTATTGCTGGTCCGGCCGACAAGCCCATCATTGTTGTTAGCTACAAGAATGAGGAGAAGCAGTTCACTGCTGAGGAGATTTCCTCCATGGTCCTCGTCAAGATGCGTGAGATCGCCGAGGCTTATCTTGGTTCCACCGTGAAGGACGTTGTTGTCACTGTTCCAGCAT 220 0.4955 RFSDASVQSDMKLWPFKVIAGPADKPIIVVSYKNEEKQFTAEEISSMVLVKMREIAEAYLGSTVKDVVVTVPA 73
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme1059621g00001 73 Pfam Hsp70 protein 1 73 IPR013126 GO:0005524|GO:0140662
Trme1059621g00001 73 Gene3D - 1 73 - -
Trme1059621g00001 73 FunFam heat shock 70 kDa protein-like 15 73 - -
Trme1059621g00001 73 SUPERFAMILY Actin-like ATPase domain 2 73 IPR043129 -
Trme1059621g00001 73 FunFam heat shock 70 kDa protein-like 1 47 - -
Trme1059621g00001 73 PANTHER HEAT SHOCK PROTEIN 70KDA 1 73 IPR013126 GO:0005524|GO:0140662
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme1059621g00001 Trme-Chr1059621 1 220 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme1059621g00001 1 73 Calmodulin-binding Proteins AT5G02500 80.822 4.86e-37 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme1059621g00001 K03283 - msin:131243664 130.183