Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme105811g00001 ATGATACCTTCTAAGGTTCCATTGGGTGAAGCTTTCAATGACTATATTGTTCCTGGTAAAAGATACTCATTTAAACAAGTGATACATCAACAGAGAGTTTTAGGGAGAAAACTTGGTCTGGTCATTGATTTGACAAATACTTCTAGATACTATCCAGTATCAGATCTAAAGAAAGAGGGTATCAAGCATGTTAAG 195 0.3487 MIPSKVPLGEAFNDYIVPGKRYSFKQVIHQQRVLGRKLGLVIDLTNTSRYYPVSDLKKEGIKHVK 65
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme105811g00001 65 PANTHER MRNA-CAPPING ENZYME 1 65 - -
Trme105811g00001 65 Gene3D Protein tyrosine phosphatase superfamily 1 65 IPR029021 -
Trme105811g00001 65 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 2 65 IPR029021 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme105811g00001 1 65 Protein tyrosine phosphatase (PTP) family AT3G09100 73.846 5.77e-30 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme105811g00001 K13917 - gmx:100803597 131.339