Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme105784g00001 ATGACTCTATTTCCTGCAAGTCAAAAAAACAATGTTTCATTAGTTGGTTCTTCTGATCAGTTAGCATCAGGTGGTGATGTTTCAACTTCAACACAAACAAGTCCATTGATTGGAAGCTTTCATGAAAATGAGGATGCTTCTTCTTCAGATATTGAGATCCTAATTGCAGAAGGGGAAGGAGCAATTACGAAGAGAACGAGACCAAAAAGGGGAGATGATTTTAAGTTCAAAGAAGCTTTAGTTAAGGCTGATTTTTGGCTACTTTGGTTTGCTTATTCATTAGGAGTTGGCTCAGGAGTAACTGTTCTCAATAATTTGGCTCAAATTGGAGTTGCTTTGGGTGTTGAAGATGCAACCATATTGCTTTCAGTCTTCAGCTTTTGCAATTTTATCGGTCGACTAGGTGCTGGTGCCGTCTCTGAACACTTTGTCAGTTCTATCCTCCTCGCTTAG 453 0.3951 MTLFPASQKNNVSLVGSSDQLASGGDVSTSTQTSPLIGSFHENEDASSSDIEILIAEGEGAITKRTRPKRGDDFKFKEALVKADFWLLWFAYSLGVGSGVTVLNNLAQIGVALGVEDATILLSVFSFCNFIGRLGAGAVSEHFVSSILLA 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme105784g00001 150 SUPERFAMILY MFS general substrate transporter 66 143 IPR036259 -
Trme105784g00001 150 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 45 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme105784g00001 Trme-Chr105784 42 627 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme105784g00001 1 146 Nodulin-like Gene Family AT1G80530 55.484 5.34e-48 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme105784g00001 - - mtr:120578424 220.32