Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme105686g00001 GTGACACAATTTGGTTGTGGGGGTTTTGTGATAGGTCTAGTGTTCAGCCATAGTATATGTGATGGCCTTGGTGCTGCACAATTTCTAAATGCAGTTGGGGAGCTAGCTAGAGGACTTGACAAACCCACCATCGAACCAGTGTGGAATAGGAACTTTTTTCCCTCTCCTCAAGCACCTTCACTGCCAAAAATATCTCTTGCTTGTCCACCTCAAATGCCACACTACAATCTAGAGCATTCTAATATAGACATGCCTATGGATCAAATCAACCGGCTGAAGAGACAGTTCCAGCAAGTAACTGGWCAAASTTGTTCTACCTTCGAAATTGTTGCTGCATTGTTTTGGAGCAGCAGAACAAGAGCCATAAATTTTGGTCCCAACACCAAAGTGAAGCTTGTGTTCTTTGCAAATTGTCGACACCTCATAAACCCTCCCCTGCCCAAGGGTTTCTACGGAAACTGTTTCTTCCCGGTGACAACTACAGCTTCATGCGAGTCACTTAGAAAAGAACCAAATATCTTTGAAGTGGTGAAGCTGATCCAAGAAGCAAAGGCCAGGTTACCTTTGGAGTT 572 0.4406 VTQFGCGGFVIGLVFSHSICDGLGAAQFLNAVGELARGLDKPTIEPVWNRNFFPSPQAPSLPKISLACPPQMPHYNLEHSNIDMPMDQINRLKRQFQQVTGQXCSTFEIVAALFWSSRTRAINFGPNTKVKLVFFANCRHLINPPLPKGFYGNCFFPVTTTASCESLRKEPNIFEVVKLIQEAKARLPLE 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme105686g00001 190 Gene3D - 1 67 IPR023213 -
Trme105686g00001 190 Gene3D - 68 190 IPR023213 -
Trme105686g00001 190 PANTHER ACYL TRANSFERASE 4 1 189 - -
Trme105686g00001 190 Pfam Transferase family 1 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme105686g00001 Trme-Chr105686 100 671 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme105686g00001 1 174 Monolignol Biosynthesis Gene Families AT5G48930 29.787 1.45e-15 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme105686g00001 - - mtr:11426631 326.635