Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme10557g00001 ATGGCTTCTTACTACTTCCTCTTGTTTTTTCTTGTTGCTGCTTTTGCAATTTCTGAAGCAGATGGCAAAGAGAAGTTATCTACAGATTTCTACTGCAGCAGCTGCCCGGAACTGTTGTCTATAGTGAACAACGGAATCATATCAGCCATTAAAAAAGAAACTCGCATCGGAGCTTCCTTACTTCGATTGCATTTCCATGACTGCTTTGTAAACGGCTGTGATGCATCAATACTGTTGGATGATACAAGCAGTTTCATAGGAGAAAAAACAGCAGCAGCTAACAATAATTCAGCTAGAGGATTCAATGTGATTGATGACATTAAAGCCAAAGTGGAGAAAGCATGCCCAAGGGTTGTGTCCTGTGCTGATATTCTTGCTCTGGCTGCTAGAGACTCTGTTGTTCATCTAGGAGGCCCTTCTTGGAAAGTAGGCTTGGGAAGAAGAGATTCAATCACAGCTAGTAGATCTGATGCTAATAMCTCAATTCCTGCACCCTTTCTCAATCTAAGTGCTCTCAAAACAAATTTTGCTAACCAAGGGCTCTCAGTGAAAGACTTGGTGGCTCTTTCAGACCAAGAACTGTTCAATGGGAGTTCTACTACCGACAATCTTGTGAAGAAATATGCTACTAATAATGATGCATTTTTTAAAGCCTTTGCCAAAGGTATGGTCAAATTGAGCAGCATCAAGCCCCTCACAGGAAGCAAAGGACAGATCAGACTCAATTGCAGAAAAGCCAACTGA 744 0.4153 MASYYFLLFFLVAAFAISEADGKEKLSTDFYCSSCPELLSIVNNGIISAIKKETRIGASLLRLHFHDCFVNGCDASILLDDTSSFIGEKTAAANNNSARGFNVIDDIKAKVEKACPRVVSCADILALAARDSVVHLGGPSWKVGLGRRDSITASRSDANXSIPAPFLNLSALKTNFANQGLSVKDLVALSDQELFNGSSTTDNLVKKYATNNDAFFKAFAKGMVKLSSIKPLTGSKGQIRLNCRKAN 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme10557g00001 247 SUPERFAMILY Heme-dependent peroxidases 26 247 IPR010255 GO:0004601|GO:0006979|GO:0020037
Trme10557g00001 247 PANTHER PEROXIDASE 72-RELATED 190 245 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trme10557g00001 247 PRINTS Haem peroxidase superfamily signature 119 136 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trme10557g00001 247 PRINTS Haem peroxidase superfamily signature 137 149 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trme10557g00001 247 PRINTS Haem peroxidase superfamily signature 57 71 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trme10557g00001 247 Pfam Peroxidase 46 190 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trme10557g00001 247 ProSitePatterns Peroxidases active site signature. 57 68 IPR019794 GO:0004601
Trme10557g00001 247 FunFam Peroxidase 29 165 - -
Trme10557g00001 247 ProSiteProfiles Plant heme peroxidase family profile. 25 247 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trme10557g00001 247 PRINTS Plant peroxidase signature 184 196 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trme10557g00001 247 PRINTS Plant peroxidase signature 99 112 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trme10557g00001 247 PRINTS Plant peroxidase signature 137 152 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trme10557g00001 247 PRINTS Plant peroxidase signature 59 79 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trme10557g00001 247 PRINTS Plant peroxidase signature 35 54 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trme10557g00001 247 PRINTS Plant peroxidase signature 118 128 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trme10557g00001 247 Gene3D - 26 177 - -
Trme10557g00001 247 CDD secretory_peroxidase 25 245 IPR033905 GO:0004601|GO:0042744
Trme10557g00001 247 Gene3D Peroxidase, domain 2 189 226 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme10557g00001 Trme-Chr10557 251 1575 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme10557g00001 190 247 Peroxidase AT5G05340 48.276 3.95e-10 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme10557g00001 K00430 - zju:107413963 278.87