Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme10548g00001 CTTCCCGGTACTTTAGCACGCTTCACTGGTTTAAGTGCACTAAAAAATGCTGCAGTGGCATTGAATCCGGGAGGCTCCTTCTATCTTCCATTTAACATACTTTTGATAGCCTTCTTCAACTACTACTACACTTTCCTACAACTGGATCCCGATGATGTGAGCGAACAATTGAAACGTCAAGGTGCTTCAATTCCACTTGTCAGACCAGGCAAAAGTACAGCTACATTTATTAAAACCGTTCTTAGTCGAATATCGGTTCTGGGTTCAACATTTTTGGCAATTTTGGCTGCTGGACCTGCAGTTGTTGAGCAGACGGCACACTTGACTGCATTCCGGGGATTTGCAGGAACATCTATTCTTATTCTTGTTGGTTGCGCAACAGATACAGCAAGAAAAGTTCGAGCTGAGATTATATCCCAGAAATACAAAAACATAGAGTTATATGACTTCGATAAGTATTGA 462 0.4156 LPGTLARFTGLSALKNAAVALNPGGSFYLPFNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTATFIKTVLSRISVLGSTFLAILAAGPAVVEQTAHLTAFRGFAGTSILILVGCATDTARKVRAEIISQKYKNIELYDFDKY 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme10548g00001 153 Gene3D SecY subunit domain 1 142 IPR023201 -
Trme10548g00001 153 PRINTS Preprotein translocase SecY subunit signature 81 99 - -
Trme10548g00001 153 PRINTS Preprotein translocase SecY subunit signature 26 48 - -
Trme10548g00001 153 PRINTS Preprotein translocase SecY subunit signature 115 133 - -
Trme10548g00001 153 PANTHER SECY/SEC61-ALPHA FAMILY MEMBER 20 145 IPR002208 GO:0015031|GO:0016020
Trme10548g00001 153 Pfam SecY 2 129 IPR002208 GO:0015031|GO:0016020
Trme10548g00001 153 SUPERFAMILY Preprotein translocase SecY subunit 14 136 IPR023201 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme10548g00001 1 153 Chloroplast and Mitochondria Gene Families AT2G18710 88.889 8.40e-93 277
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme10548g00001 K10956 - gmx:100810430 286.574