Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme1053813g00001 ATGACAGGAGAAATAGGTGTGATGTTTAATATCCCACAACCTTATACAGTGAGAAGTAGAAGACTCTCCCAGGTTATACGAATCAACCATCATCATTTCAAGCAGATGGTGAAACCATATAGTGAAGATGGGAAGGCAATCATCAGCAACTTTACTCAG 159 0.3962 MTGEIGVMFNIPQPYTVRSRRLSQVIRINHHHFKQMVKPYSEDGKAIISNFTQ 53
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme1053813g00001 53 SUPERFAMILY cAMP-binding domain-like 2 51 IPR018490 -
Trme1053813g00001 53 PANTHER POTASSIUM CHANNEL AKT1 1 53 IPR045319 GO:0005249|GO:0006813
Trme1053813g00001 53 Gene3D Jelly Rolls 1 53 IPR014710 -
Trme1053813g00001 53 ProSiteProfiles cAMP/cGMP binding motif profile. 1 53 IPR000595 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme1053813g00001 1 51 Ion Channels AT4G32650 69.231 1.76e-19 77.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme1053813g00001 K21867 - gmx:100794620 93.5893