Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme1052941g00001 ATGATTGCTAACTCCGATGATAAAACCGTTCTGGCAACCCACCTCTCGCGTCAAACAAAGGAGGACACTCATTTGCTTGAGCTTTTCAAGCCTATTGGTTATGTGCGCAGTGCCAAGCTTGCTATTGATCATGAAACTGGCCTTGGTGGGGGATTTGGCTTT 162 0.4691 MIANSDDKTVLATHLSRQTKEDTHLLELFKPIGYVRSAKLAIDHETGLGGGFGF 54
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme1052941g00001 54 Gene3D - 3 54 IPR012677 -
Trme1052941g00001 54 SUPERFAMILY RNA-binding domain, RBD 5 54 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme1052941g00001 Trme-Chr1052941 8 169 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme1052941g00001 1 54 Eukaryotic Initiation Factors Gene Family AT3G11400 44.444 2.23e-08 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme1052941g00001 - K03248 tpra:123898674 63.929