Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme10525g00001 TTAGTGAATGAGGAAGTTGGTTCACTGGTTTGGCAAGGTGTGGAATTATCCATTCCTGAAGATCTATCAGAGCTCTTCGGTACTACATTACCGACGGTTGTTTATCTAGAAATCCCAAATGGAGAAAGTTTTGCAGAAGCCCTTCATATTAAGGGAATCCCGTATGTTGTATTTTGGAAGAATGCCTTTTCTCAATATGCTGCCTGCCATTTTCGTCAAGCATTTTTTTCAGTGGTGCAGAGTTCATGTACACATACATGGGATGCTTTCCACCTTGCACATGCCTCTTTTGAACTTTACTGTGTTCAAAACAGTCAAGTACTTCCTAATGATAGCAATGATGCTGATAGCGATATGGGGCCACACCTTCTTGGCGACTGCCTCAAAATTAATGTTGACCCTCCAGAGATGGGTGAAGAAGAAGATGAAGATGATGAAGAAAGTTCAGGCAATCTTCCTTCCATACAGATTCATGATGATGAAGTGAATTTGAGATTTCTCATCTGTGGTGCACCTTCCACTGTT 525 0.4133 LVNEEVGSLVWQGVELSIPEDLSELFGTTLPTVVYLEIPNGESFAEALHIKGIPYVVFWKNAFSQYAACHFRQAFFSVVQSSCTHTWDAFHLAHASFELYCVQNSQVLPNDSNDADSDMGPHLLGDCLKINVDPPEMGEEEDEDDEESSGNLPSIQIHDDEVNLRFLICGAPSTV 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme10525g00001 175 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 4 3 175 IPR042293 -
Trme10525g00001 175 MobiDBLite consensus disorder prediction 134 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme10525g00001 Trme-Chr10525 1 1697 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme10525g00001 3 175 ARID Transcription Factor Family AT3G43240 54.023 1.05e-56 187
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme10525g00001 - - vvo:131616466 324.324