Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme1052451g00001 CTTCTTGAGGCCCTTGACCAAATCACCGAGCCTAAGAGGCCATCAGACAAGCCCCTCCGATTACCACTTCAGGATGTTTACAAGATTGGAGGAATTGGAACTGTGCCTGTGGGACGTGTTGAGACTGGTACCATGAAACCTGGAATGGTGGTGACTTTTGCACCAACTGGATTGCAAACTGAAGTCAAGTCTGTGGAGATGCATCATGAATCTCTCACTGA 221 0.4842 LLEALDQITEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGTMKPGMVVTFAPTGLQTEVKSVEMHHESLT 73
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme1052451g00001 73 SUPERFAMILY Translation proteins 11 70 IPR009000 -
Trme1052451g00001 73 Coils Coil 62 73 - -
Trme1052451g00001 73 PANTHER ELONGATION FACTOR 1 ALPHA 1 72 - -
Trme1052451g00001 73 Gene3D Translation factors 14 73 - -
Trme1052451g00001 73 Pfam Elongation factor Tu domain 2 33 72 IPR004161 GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme1052451g00001 Trme-Chr1052451 1 221 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme1052451g00001 1 72 Eukaryotic Initiation Factors Gene Family AT5G60390 94.444 2.40e-42 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme1052451g00001 K03231 - gmx:100499630 140.584