Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme105183g00001 ATGCCAATAAACCTTCCAGGAACACTTTTCAACAAAGCTATGAAAGCAAGAAAAGAGCTTGCACAGATCTTAGAACAAATAATCTCAACAAGGAGGTGCAAAAAGCAAGAATACAATGATTTGTTAGCTTCATTCATGGATGAAAAAGCAGGACTCAGTGATGAACAAATATCAGATAATATCATTGGTGTCATTTTTGCTGCTAGAGATACAACTGCTAGTGTGCTGACGTGGATTGTTAAGTACCTTGGTGAAAATCCTAGTGTCCTTGAATCAGTCACA 282 0.3723 MPINLPGTLFNKAMKARKELAQILEQIISTRRCKKQEYNDLLASFMDEKAGLSDEQISDNIIGVIFAARDTTASVLTWIVKYLGENPSVLESVT 94
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme105183g00001 94 Pfam Cytochrome P450 5 93 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme105183g00001 94 SUPERFAMILY Cytochrome P450 6 92 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme105183g00001 94 PANTHER CYTOCHROME P450 26 1 92 - -
Trme105183g00001 94 Gene3D Cytochrome P450 1 94 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme105183g00001 Trme-Chr105183 68 349 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme105183g00001 1 94 Cytochrome P450 AT5G45340 76.596 9.07e-47 153
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme105183g00001 K09843 - gmx:100807446 157.532