Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme10504g00001 ATGGAGAAAGTTTGTGAATTCTGCACAGCACTGAGGCCACTTGTTTACTGTAATGCTGATACAGCATATCTTTGTCTATCTTGTGATGCAAAAGTTCATTGGGCAAATGAATTGTCTGGCCGGCACATCCGGACCCTTGTGTGTAACTCGTGCAGATGCGATCTTGCTTATGTTCAGTGTTTGGATCACAAAATGTTACTCTGTCGAGACTGTGATCAAAAGTTGCATGATAGTTCTTCACCGCATCGCAAACGAGCTGTCAAAACTTTCATCGGCTGCCCTTCTGCCAAAGAGTTTGCAGCACTTTGGGGATTTGAATTTAAGGAGATTGAAAAGAGTGTTGTCAGT 348 0.431 MEKVCEFCTALRPLVYCNADTAYLCLSCDAKVHWANELSGRHIRTLVCNSCRCDLAYVQCLDHKMLLCRDCDQKLHDSSSPHRKRAVKTFIGCPSAKEFAALWGFEFKEIEKSVVS 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme10504g00001 116 ProSiteProfiles Zinc finger B-box type profile. 43 87 IPR000315 GO:0008270
Trme10504g00001 116 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 2 106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme10504g00001 Trme-Chr10504 1 348 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme10504g00001 1 114 C2C2-CO-like Transcription Factor Family AT1G68190 55.652 3.51e-41 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme10504g00001 - - cam:101505436 223.787