Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme105032g00001 ATGGATACATCAACWGCTTTAATGATCTTAACAGCCATAGCAGCCTACTTAATATGGTTCTCATTCATCACACGATCATTAAAAGGTCCACGTGTCTGGCCTATATTGGGTAGTTTACCTGGTCTCATCCACCATGCCAACCGCATGCACGACTGGATCGCTGAAAATCTACGCGCGTGTGGCGGCACGTACCAAACCTGCATCTGCGCCGTTCCTTTCCTCGCTAGAAAACAGTGTCTCATCACTGTCACGTGCGACCCCAAAAACCTTGAACACATTCTCAAACTCCGTTTCGATAATTACCCGAAAGGTCCTACGTGGCAGTCAGCATTTCATGACTTACTCGGAGAAGGTATATTCAACTCAGATGGTGACACGTGGAAGTTCCAGCGTAAAACCGCCGCACTTGAATTCACCACTCGTACCCTACGACAAGCCATGTCTCGTTGGGTTAGCCGAGCCATAAAGTTTAGATTCTGTCCCATTTTAGCCACGGCTCAGGAAGAAAAAAACCCGGTCGATCT 524 0.4771 MDTSTALMILTAIAAYLIWFSFITRSLKGPRVWPILGSLPGLIHHANRMHDWIAENLRACGGTYQTCICAVPFLARKQCLITVTCDPKNLEHILKLRFDNYPKGPTWQSAFHDLLGEGIFNSDGDTWKFQRKTAALEFTTRTLRQAMSRWVSRAIKFRFCPILATAQEEKNPVDL 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme105032g00001 175 SUPERFAMILY Cytochrome P450 20 164 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme105032g00001 175 PANTHER CYTOCHROME P450 19 175 - -
Trme105032g00001 175 Pfam Cytochrome P450 28 154 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme105032g00001 175 Gene3D Cytochrome P450 23 175 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme105032g00001 Trme-Chr105032 1 524 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme105032g00001 1 175 Cytochrome P450 AT2G45970 77.714 1.28e-101 300
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme105032g00001 K15398 - gmx:100792719 337.421