Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme104896g00001 ATGACAGAATATGTTGTGACTCGTTGGTACAGAGCCCCTGAATTGCTACTGAACTGTTCAGAATATACTGCTGCTATTGATTTGTTAGGGTCACCAAATGAAGAAGATCTCGGGTTCCTCCGAAGTGATAATGCAAAGAAATATGTTAAGCAGCTCCCGCACGTAGACAAACAGCCCTTTTCACAAAGGTTTCCTGATATATCCCCACTGGCAATTGATCTTGCTGAGAAAATGTTGGTTTTTGATCCCTCCAAACGCATAACTG 265 0.4226 MTEYVVTRWYRAPELLLNCSEYTAAIDLLGSPNEEDLGFLRSDNAKKYVKQLPHVDKQPFSQRFPDISPLAIDLAEKMLVFDPSKRIT 88
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme104896g00001 88 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 1 28 - -
Trme104896g00001 88 Gene3D Transferase(Phosphotransferase) domain 1 6 27 - -
Trme104896g00001 88 Gene3D Transferase(Phosphotransferase) domain 1 28 88 - -
Trme104896g00001 88 SUPERFAMILY Protein kinase-like (PK-like) 1 88 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme104896g00001 Trme-Chr104896 27 512 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme104896g00001 1 88 MAP Kinase Gene Family AT1G07880 60.833 1.11e-42 140
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Trme104896g00001 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme104896g00001 K04371 - gmx:100802929 152.525