Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme104807g00001 ATGCTCCACCATAAGAAGGTTCTTTTGGTTCTTGACGATGTTAATAGCTCAGATCAGTTGCAAGCTATTKTTGGAGGAGGCATTGACTCTTTTGGGTATGGCAGCACCATCATCATTACTACCAGGGACAAACAGTTTCTAACAACTAACGGGGTTGATACAACATACAAG 171 0.4152 MLHHKKVLLVLDDVNSSDQLQAIXGGGIDSFGYGSTIIITTRDKQFLTTNGVDTTYK 57
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme104807g00001 57 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 52 IPR027417 -
Trme104807g00001 57 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 2 47 IPR044974 GO:0006952
Trme104807g00001 57 Pfam NB-ARC domain 1 45 IPR002182 GO:0043531
Trme104807g00001 57 Gene3D - 1 53 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme104807g00001 Trme-Chr104807 46 216 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme104807g00001 2 57 WRKY Transcription Factor Family AT5G45050 42.857 7.74e-07 42.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme104807g00001 - - mtr:11444105 96.6709