Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme10454g00001 GGAAATCTTCTCCCAATTTCACAAGTGCGTGATGATGTAGCGGCTGCTTACAGACAGGAAGTGGAGTGGCAGACAAATCAAATGCTTCTACCTTATAAGAAAATGTGTGAGCAGAGAAAGGTGCAAGTAGAGGTTGTAGTGATTGAATCGGATGATGTGGCATCTGCCGTGGCGGAGGAAATATCTAAGGATGGTATAACCAAATTGGTTGTTGGAGCTTCATCTGGTGGCTTATTTAAAAGTAAACATAAGGGCATGTCTGCAAAAATCTCAGTTTGCACTCCAAGATTTTGTACAGTTTATGCTGTTTCTAAAGGAAAAYTGTCCATACGGCCATCGGACATGCAGATTGATGAAAGCATTACAGATGACACAAGTGAAATCAGCTTTTCCTCCAGCAGCTCATCAAACTACACTTCTACCACTCAGACAGATTCTGGCTCGGTTGCATCATATGCTGCTTTACATTCATCTTCCTTGGCAACACAGCGATTTCAAGCTCTTTCAAATATGAATCAGAACCTTCTAAACACAACTCCTAGTTTGAATGAAACTAATCATTCTAGAGGCCAGTCCATTGATCTTGGACGAGGAAATGTTGCTACAAGTTCTGCTAGAAACTCAGATTTTGACCGTGGTCTGAGTCGAGCCTCTAGTTTCAGAAGCATTGTTTCAGATACTGATACTTGGGTTTATGATCAAAATTCTTTAAAGGATGCGCCACTAGCTTCTAAACTTGCGTCACCTAATAGACAGGAAAATTTTAACCTTGAGCTGGAAAAGTTGAGAATTGAACTAAGACATGTCCAAGGAATGCATGCAGTAGCTCAAACTGAGAACAT 842 0.4086 GNLLPISQVRDDVAAAYRQEVEWQTNQMLLPYKKMCEQRKVQVEVVVIESDDVASAVAEEISKDGITKLVVGASSGGLFKSKHKGMSAKISVCTPRFCTVYAVSKGKLSIRPSDMQIDESITDDTSEISFSSSSSSNYTSTTQTDSGSVASYAALHSSSLATQRFQALSNMNQNLLNTTPSLNETNHSRGQSIDLGRGNVATSSARNSDFDRGLSRASSFRSIVSDTDTWVYDQNSLKDAPLASKLASPNRQENFNLELEKLRIELRHVQGMHAVAQTEN 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme10454g00001 280 PANTHER OS02G0152300 PROTEIN 7 279 - -
Trme10454g00001 280 MobiDBLite consensus disorder prediction 176 212 - -
Trme10454g00001 280 CDD STK_N 4 106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme10454g00001 Trme-Chr10454 192 1700 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme10454g00001 1 279 U-box Gene Family AT4G25160 40.000 4.60e-45 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme10454g00001 - - gsj:114409387 380.178