Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme104426g00001 TGTAATATTAATGTTTGTACTGAACCAGATCAAGAATTAAAGCCAGTGCCAGCTGATGATGAATTGAATAATATATTTGAGCAACAAGAGGCTAAAGATGAAAATTTTCTGAAATTTGGATATGAAATTCCAAGCATGGAAATTGATACAAATAATGAAGCTGCATATAATTATGTAAAAAAAGTTTTAGAACTCTCAGGCTTCACCAGCAATGAATCTCTTGGAACATGGTATTCAGATAATCAACCACTTGATCCATCAGTTTATGAAGAATTAGAAGGATGTTTACTTCTTGATCCTGATTGTTCTGGTAATTGTGATGAAGGTGGACAATGCAATCATATTCTTCTATTTGATATAATCAATGAAGGATTATTGGAGATTTTTGGAAGATCATATAATTATTATCCTAGGCCTTTATCTTCACTATCTTATGTTCATCCATTGCCAAATGGAGGAGATAATGTTTTGCATAAAGTATGGAAACTTATTAGTTGGTATCTTAATTCAGCTCCTAAAGAGGCTTATGCTTATACATCATTGGATTACTATGTTGGTAAAGATTTAGCAAAAAATGATGGATGGATGAATCTTCAATTTGATTCTGAATGTGTTGGGCTTGAGATAGATGATTTGATTTTTGATGATCTCTTGGAGGAAATTATCTACACTTAA 675 0.3156 CNINVCTEPDQELKPVPADDELNNIFEQQEAKDENFLKFGYEIPSMEIDTNNEAAYNYVKKVLELSGFTSNESLGTWYSDNQPLDPSVYEELEGCLLLDPDCSGNCDEGGQCNHILLFDIINEGLLEIFGRSYNYYPRPLSSLSYVHPLPNGGDNVLHKVWKLISWYLNSAPKEAYAYTSLDYYVGKDLAKNDGWMNLQFDSECVGLEIDDLIFDDLLEEIIYT 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme104426g00001 224 PANTHER PROTEIN TRM32 12 223 IPR044257 -
Trme104426g00001 224 Pfam Domain of unknown function (DUF4378) 56 220 IPR025486 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme104426g00001 Trme-Chr104426 1 675 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme104426g00001 46 214 TRM (TON1 Recruiting Motif) Superfamily AT5G02390 53.179 3.23e-57 192
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme104426g00001 - - vvo:131600233 364.385