Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme10436g00001 GAAAATGCAAATTATAAAGGACTTGCTTCTGGTTTAGCTAGAGGAGGAGCACCTTTGGCTCACTTGGCTATCTACAAAGCTTGCTGGGACGTTCCTATCGGACACTGCACTGATGCTGATATCCTCAAAGCATTTGACATGGCTATACATGATGGTGTCGATGTCTTAACCGTTTCTCTTGGTATCACCATTCCTTTGTTCTCTTATGTTGATCAACGCGACACAATAGCAATTGGTTCTTTCCATGCAACTTCTAAGGGTATAACAGTTGTGTGTTCAGCTGGAAATTCTGGCCCTATTTCTCAAACCGTTACAAATACAGCACCATGGCTCATTACAGTTGCAGCTACTACAATAGATAGAGCTTTTCCAACAGCCATTACACTCGGAAATAACCTCACTTTGTGGGGACAGTCCATTGACAATGGAAAACATAATCTTGGATTTGCTGGCCTCACATATTCCGAACGCATTGCTCGTGATCCATCGGATGATTTAGCCAAGGATTGTCAGTCTGGAAGTCTGAATGAAACAATGGCAGCAGGAAAAATTGTTCTATGCTTTTCAGTATCAGATCAACAGGATATCGTTTCTGCCGCACTTACTGTAAAGGAAGCCGGTGGAGTTGGACTAATATATGCACAACATCAAGAAGATGGACTCAATGAATGTGGTATACTTCCATGCATTAAGGTAGATTATGAAGCAGGGACACAACTATTAACCTATATTAGAAGAGCAAGGTTTCCAACAGCAAGAATAAGTTTTCCAAAGACTGTTATTGGAAAATGGATATCTCCAAGAGTTGCATCTTTCTCATCTAGAGGACCTAGTACCATGTCTCCAACTGTGCTAAAGCCTGACATAGCTGCACCTGGTGTGGACATTTTGGCAGCATTTCCACCTAAGGGAACTAAAAAGAGCAGTGGCTTTACATTCTTATCTGGAACTTCAATGTCTTGTCCCCATGTGGCAGGAATAGCTGCACTCATCAAATCCAAACACCCAAATTGGTCACCTGCGGCCATAAGATCGGCT 1038 0.4239 ENANYKGLASGLARGGAPLAHLAIYKACWDVPIGHCTDADILKAFDMAIHDGVDVLTVSLGITIPLFSYVDQRDTIAIGSFHATSKGITVVCSAGNSGPISQTVTNTAPWLITVAATTIDRAFPTAITLGNNLTLWGQSIDNGKHNLGFAGLTYSERIARDPSDDLAKDCQSGSLNETMAAGKIVLCFSVSDQQDIVSAALTVKEAGGVGLIYAQHQEDGLNECGILPCIKVDYEAGTQLLTYIRRARFPTARISFPKTVIGKWISPRVASFSSRGPSTMSPTVLKPDIAAPGVDILAAFPPKGTKKSSGFTFLSGTSMSCPHVAGIAALIKSKHPNWSPAAIRSA 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme10436g00001 346 ProSiteProfiles Serine proteases, subtilase domain profile. 1 346 - -
Trme10436g00001 346 CDD PA_subtilisin_like 127 254 - -
Trme10436g00001 346 ProSitePatterns Serine proteases, subtilase family, serine active site. 316 326 IPR023828 -
Trme10436g00001 346 FunFam subtilisin-like protease SBT1.5 120 261 - -
Trme10436g00001 346 Gene3D Peptidase S8/S53 domain 2 346 IPR036852 GO:0004252|GO:0006508
Trme10436g00001 346 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 2 346 IPR045051 -
Trme10436g00001 346 Pfam Subtilase family 13 345 IPR000209 GO:0006508|GO:0008236
Trme10436g00001 346 Gene3D - 121 261 - -
Trme10436g00001 346 SUPERFAMILY Subtilisin-like 10 346 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme10436g00001 Trme-Chr10436 3 1701 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme10436g00001 4 346 Subtilisin-like Serine Gene Family AT4G10540 53.009 1.15e-114 348
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme10436g00001 - - gmx:100792709 627.091