Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme104343g00001 ATGGTAGGAGCTCAAACAACAGAGCAAGGTGACTGTTCAAGATTCAAAGGCAACAAACCTCTTTGTTGCAAGAAAATCCCTGCTGTTGTAGACCTTCACCCCGGTCTACCGATCAATCAGCAAGTCCCGAACTGTTGCAAAGCTGGTGTAGTTGCAGCATTGGGACAATCAGCTTTTGAAGTTGCTGTAGGAGAAGCTGTGACATGGGATGCTATCTGCAAATACTCACAAGGTTAA 237 0.4557 MVGAQTTEQGDCSRFKGNKPLCCKKIPAVVDLHPGLPINQQVPNCCKAGVVAALGQSAFEVAVGEAVTWDAICKYSQG 78
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme104343g00001 78 Pfam COBRA-like protein 1 65 IPR006918 GO:0010215|GO:0016020
Trme104343g00001 78 PANTHER PROTEIN COBRA 1 69 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme104343g00001 Trme-Chr104343 7 478 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme104343g00001 1 68 COBRA Gene Family AT5G15630 64.865 6.47e-26 95.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme104343g00001 - - cqi:110722220 109.383