Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme104337g00001 TTGGCCTCTTTCTCCGGCGCCGATCAAACTCAACCGTCAACCGATTTTTCAAACGCAACCTCTGTCTTTATGGACTCCATCACCGGAGGTCCGTCTCCCGTTAACTTTGCTCCGCCGCGTCCTCCGTCGTCATATCCGTTCCCCGGCCGGGAAGACTGTTGGAGCGAGGACGCAACTTCCACCCTCGTCGACGCCTGGGGAGAGCGCTACGTCGACCTCAACCGTGGTAACCTCCGTCAGAAGCACTGGCAAGAGGTTGCCGACGCCGTCAACGACATCCACGCCGCCGGCAACAACAGGAAAGCACGCCGGACCGACGTTCAGTGCAAAAACCGAATCGACACGCTCAAGAAGAAGTACAAGATCGAGAAAGCTAGGGTTTCCGAATCCGACGGCGGTTACCAGAGTCCCTGGCCATTCTTCTCTCGTCTCGACATCCTCATCGGCGATACTTTCCCGGTAAAAAAACTCTCACCGCCGGCAACCGTACGCACCACCCCTGCCGCCGTAAAACCACCTCTGTCTCCGCCGGCATGGATTATCTCTCATCCGGTAGGTCCCCGATCTGGAACGCAGAAACGTCCGGCACTGATGAACAGAGACGACGCATCTTTCCGGCGGAATTTCTCAGCCTTCGCGGCGGCTGCTGCGGCGGCGGCAGAGGCGGAAAGCGG 674 0.589 MASFSGADQTQPSTDFSNATSVFMDSITGGPSPVNFAPPRPPSSYPFPGREDCWSEDATSTLVDAWGERYVDLNRGNLRQKHWQEVADAVNDIHAAGNNRKARRTDVQCKNRIDTLKKKYKIEKARVSESDGGYQSPWPFFSRLDILIGDTFPVKKLSPPATVRTTPAAVKPPLSPPAWIISHPVGPRSGTQKRPALMNRDDASFRRNFSAFAAAAAAAAEAESG 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme104337g00001 225 Gene3D - 54 122 - -
Trme104337g00001 225 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 38 195 IPR044823 -
Trme104337g00001 225 MobiDBLite consensus disorder prediction 1 28 - -
Trme104337g00001 225 FunFam trihelix transcription factor ASIL2 54 122 - -
Trme104337g00001 225 MobiDBLite consensus disorder prediction 1 51 - -
Trme104337g00001 225 Pfam Myb/SANT-like DNA-binding domain 51 145 IPR044822 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme104337g00001 Trme-Chr104337 3 676 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme104337g00001 49 189 Trihelix Transcription Factor Family AT3G14180 50.704 1.67e-38 136
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Trme104337g00001 Myb_DNA-bind_4 1.1e-25 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme104337g00001 - - lang:109355153 269.24