Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme104282g00001 AATTTAGGGAAAGGTATATTGATGAGGAAGTATATAGGGGCAGTTGCATTCAACAACATCACAAGGCTGGCATTTGGGAAAAGATTTGTGAACTCAGAAGGTGTAATGGATGAGCAAGGAGTGGAATTCAAGGCTATAGTGGCAAATGGGTTAAAGCTAGGAGCATCTCTTGCTATGGCAGAGCACATTCCTTGGTTGAGGTGGATGTTCCCATTAGAAGAGGAGGCTTTTGCCAAGCACGGTGCTCGTCGGGACCGACTTACTCGAGCTATCATGGATGAGCATACTCAGGCACGTCAGAAATCTGGTGGTGCCAAGCAACATTTTGTAGATGCTCTTCTCACTTTGCAAGACAAATATGACCTTAGTGAAGACACCATCATTGGTCTCCTTTGGGTATGTTGTTTTGTGTTTTTATAA 420 0.4381 NLGKGILMRKYIGAVAFNNITRLAFGKRFVNSEGVMDEQGVEFKAIVANGLKLGASLAMAEHIPWLRWMFPLEEEAFAKHGARRDRLTRAIMDEHTQARQKSGGAKQHFVDALLTLQDKYDLSEDTIIGLLWVCCFVFL 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme104282g00001 139 Pfam Cytochrome P450 7 125 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme104282g00001 139 Gene3D Cytochrome P450 1 137 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme104282g00001 139 PANTHER CYTOCHROME P450 98A9 5 131 - -
Trme104282g00001 139 SUPERFAMILY Cytochrome P450 4 133 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme104282g00001 1 132 Monolignol Biosynthesis Gene Families AT2G40890 83.333 6.35e-78 237
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme104282g00001 K09754 - jre:109019007 254.603