LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Trme103964g00001	GGCTGTGATGCTTCACTGCTGTTGGAGGATCGAAACAGTTCGTATGAGAAGCAGGCTATTCCAAATCAGACATTGAAAGGTTTCGACAAAATTGACTTGATTAAGGAGGAAGTGGAACAAGAATGTCCTGGCGTCGTGTCTTGTGCTGACATTATTGCTCTTGCAGCAAGAGATGCTGTTCTTTTG	186	0.4409	GCDASLLLEDRNSSYEKQAIPNQTLKGFDKIDLIKEEVEQECPGVVSCADIIALAARDAVLL	62

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Trme103964g00001	62	PRINTS	Plant peroxidase signature	26	39	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Trme103964g00001	62	PRINTS	Plant peroxidase signature	45	55	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Trme103964g00001	62	SUPERFAMILY	Heme-dependent peroxidases	1	61	IPR010255	GO:0004601\|GO:0006979\|GO:0020037
	Trme103964g00001	62	Pfam	Peroxidase	1	60	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Trme103964g00001	62	ProSiteProfiles	Plant heme peroxidase family profile.	1	62	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Trme103964g00001	62	Gene3D	-	1	62	-	-
	Trme103964g00001	62	PANTHER	PEROXIDASE 25-RELATED	1	61	IPR000823	GO:0004601\|GO:0006979\|GO:0020037

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Trme103964g00001	Trme-Chr103964	315	500	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Trme103964g00001	1	62	Peroxidase	AT4G33870	61.905	1.61e-20	80.5

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Trme103964g00001	K00430		-	tpra:123897599	112.464