Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme10393g00001 TATGACACTTTGAGAGCTCTGGAGTTTGATACTGCTTCTAGTACTCCTTCAATGACTGACGAAGAGATAAATGCCTTGCCTATTCACAAATATAAAGTTCCAGGCCCAACAAAAGATGGCTTCACCGGTTTGACATCCTCTTCAGAAGCAGCTGAGATTAAACAAGACTCTAAAGGAGCAGAGGGAAGTGCCGAAGGTCCAGAAGATGAGCTGACATGTACTATATGCTTGGACCAAGTTATGAGGGGGGAAATTGTCCGCAGCTTGCCGTGCTTGCATCAGGTTTAA 288 0.4479 YDTLRALEFDTASSTPSMTDEEINALPIHKYKVPGPTKDGFTGLTSSSEAAEIKQDSKGAEGSAEGPEDELTCTICLDQVMRGEIVRSLPCLHQV 95
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme10393g00001 95 PANTHER TARGET OF ERK KINASE MPK-1 5 94 - -
Trme10393g00001 95 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 6 95 IPR013083 -
Trme10393g00001 95 MobiDBLite consensus disorder prediction 37 69 - -
Trme10393g00001 95 SUPERFAMILY RING/U-box 68 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme10393g00001 Trme-Chr10393 167 1700 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme10393g00001 1 95 C3H Transcription Factor Family AT3G55530 56.250 1.32e-26 97.1