Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme103927g00001 ATGCCGGATGAGCAGAGGAATCCAATTCAAGAATATCAGGTTGCTCACATTCCTGGGGCTCTTTTCTTTGATGTAGACGGAATAGCAGATCGAACAACAAATCTGCCACACATGTTGCCATCAGAGGAAGCTTTTGCGGCTGCTGTTTCTGCTCTTGGCATACAGAACAAAGATGACTTGGTGGTTTATGATGGCAAAGGA 201 0.4527 MPDEQRNPIQEYQVAHIPGALFFDVDGIADRTTNLPHMLPSEEAFAAAVSALGIQNKDDLVVYDGKG 67
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme103927g00001 67 ProSiteProfiles Rhodanese domain profile. 4 67 IPR001763 -
Trme103927g00001 67 ProSitePatterns Rhodanese signature 1. 12 23 IPR001307 GO:0004792
Trme103927g00001 67 Pfam Rhodanese-like domain 8 67 IPR001763 -
Trme103927g00001 67 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 8 67 IPR036873 -
Trme103927g00001 67 Gene3D - 1 67 IPR036873 -
Trme103927g00001 67 PANTHER THIOSULFATE SULFERTANSFERASE 1 66 IPR045078 GO:0016783
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme103927g00001 1 67 Sulfurtransferasese or Rhodanese AT1G79230 83.582 1.11e-36 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme103927g00001 K01011 - zju:107417867 136.346