Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme103885g00001 GAATGGGTTGTCAAGGTGCCAATCATCTTAATATTTGGAGTTGCAACGACAGTGGATGCCCCAAGAAACATTTTTCCATCTCATGCTCTTGAGTGTTTGTGCCCTTCTACATTTATGCTTGTAACACCAGCTGAGAGAATGGATGCAATTGTTGTGGAAGTTCTTGTAAAACATTGCACCACTTTTAATATCGGTCATAAAGTGGCACAGTTATTGAGAAACTACTTCATCAACCAGGATGGGACAGTAACATCTTTTATAAGAGCTTTGAAGGTAGCATGCTTATTACACTTCTCTATGGAACCTTTGAGTCTCATACAAGGGAGAATTCTTGTTGAAGATCAGGTCTGTCTTAAACTCCTTACTATTTGA 372 0.3898 EWVVKVPIILIFGVATTVDAPRNIFPSHALECLCPSTFMLVTPAERMDAIVVEVLVKHCTTFNIGHKVAQLLRNYFINQDGTVTSFIRALKVACLLHFSMEPLSLIQGRILVEDQVCLKLLTI 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme103885g00001 123 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 3 1 113 IPR020795 GO:0003677|GO:0005664|GO:0006260
Trme103885g00001 123 Pfam Origin recognition complex (ORC) subunit 3 N-terminus 3 105 IPR045667 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme103885g00001 1 106 Core DNA Replication Machinery Family AT5G16690 56.604 3.55e-38 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme103885g00001 K02605 - gmx:100780646 192.2