Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme10386g00001 ATGTCTGGAATCAGTGCATCCTCAACAGAACTTAAAATGCTAAAAAATTTCAGATTTCTATCAATATCAGAGCGTAGTTACATTGGTCTTCAAACCTCTAGTCGTAGGAATTCTTTTGAAAATTCTACTATAAGTGAAGAAGCAAATCCAGAAAACTATGGAGACTATGTTGATTCCATCAGTCTCCACTCATTTGATTCCATTGCTTCTGCTCATCATGAACCGTTAGACGTGCAAGAAGTAGAACGGTTGCAACTGGAGTTACAGAATACGATTGCCATGTACAGACAGGTTTGTGAAGAACTGGTTCATGCTCAAAGCAAGGCCCTTTTACTTTCTTCTGAATCTCTCGAAGAAACTAAAATAATAAATGCTTCCTTGAAAAGAGAGGAGACTTTGAGAAAGATTGCTGCTGAAGAGAAAGCAAAGTATTTAAAAGTCATGAAGGAACTTGAGGAGTCGAAAAGTATATTTGCCAAAGAATCATATGAAAGGCAAATGGCCGAACTTAATGTCCTTAGAGAATCCATTGAAAAACAGAGAATTGTCGACACATTACTCTCAAATGACAGGAGATACAGAAAGTATACCATGGATGAAATCAAGATCGCGACAAACAACTTGTCTGAGGCCTTGGTAATTGGTGAAGGAGGATATGGGAAAGTTTATAAGTGCAATCTTGATCACACACCAGTAGCTGTAAAGGTTTTGCATCAGGACACAATCAACAAGAAANNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNNNNNNNTTTTTGA 816 0.3407 MSGISASSTELKMLKNFRFLSISERSYIGLQTSSRRNSFENSTISEEANPENYGDYVDSISLHSFDSIASAHHEPLDVQEVERLQLELQNTIAMYRQVCEELVHAQSKALLLSSESLEETKIINASLKREETLRKIAAEEKAKYLKVMKELEESKSIFAKESYERQMAELNVLRESIEKQRIVDTLLSNDRRYRKYTMDEIKIATNNLSEALVIGEGGYGKVYKCNLDHTPVAVKVLHQDTINKKXXXXXXXXXXXXXXXXXXXXXXXXXF 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme10386g00001 271 Coils Coil 81 101 - -
Trme10386g00001 271 ProSiteProfiles Protein kinase domain profile. 208 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme10386g00001 271 Coils Coil 160 180 - -
Trme10386g00001 271 Coils Coil 243 245 - -
Trme10386g00001 271 PANTHER OS02G0152300 PROTEIN 34 241 - -
Trme10386g00001 271 Coils Coil 134 154 - -
Trme10386g00001 271 ProSitePatterns Protein kinases ATP-binding region signature. 214 235 IPR017441 GO:0005524
Trme10386g00001 271 Gene3D Phosphorylase Kinase; domain 1 185 252 - -
Trme10386g00001 271 SUPERFAMILY Protein kinase-like (PK-like) 191 241 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme10386g00001 Trme-Chr10386 105 1504 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme10386g00001 80 245 Plant U-box Gene Family AT5G57035 57.831 3.69e-59 199
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme10386g00001 - - gmx:100805896 378.637