Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme103800g00001 ATTGATGTTGCTACAAATGGCTTCAACCATAGGAGAATCATTGGAAAGGGTCGTTTAGGAACAGTTTATGCAGGAAAACTAGAAAATGAAGATGTTGTAGCTGTGAAACGTATTCACCCGGTTCTTGTATTAAGCAACGCGGGATTTGGATTCTCATCAGTGATGAAGTGGCTCTCTTTAGCTCAACACCCTAACGTCGTTCCCATAATTGGATTCTCAGAAGCGCCAGGT 231 0.4242 IDVATNGFNHRRIIGKGRLGTVYAGKLENEDVVAVKRIHPVLVLSNAGFGFSSVMKWLSLAQHPNVVPIIGFSEAPG 77
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme103800g00001 77 Gene3D Phosphorylase Kinase; domain 1 1 76 - -
Trme103800g00001 77 SUPERFAMILY Protein kinase-like (PK-like) 3 77 IPR011009 -
Trme103800g00001 77 PANTHER OS01G0253100 PROTEIN 3 74 - -
Trme103800g00001 77 ProSiteProfiles Protein kinase domain profile. 8 77 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme103800g00001 77 FunFam serine/threonine-protein kinase-like protein ACR4 1 77 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme103800g00001 Trme-Chr103800 1 231 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme103800g00001 1 77 Strubbelig Receptor Gene Family AT4G22130 33.766 1.42e-10 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme103800g00001 - - mtr:11441273 150.214