Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme103796g00001 AAAACTGGAGATATCTTGTATAAGGCACAGTCTCAGGATGAAGATGCTCTCGTTCAAGCTGCTGCTCAGCTGCATATGGTTTTCTTCAATAAGAGTGGAAACATCCTTGAAGTCAAGTTCAACACTTCTATACTTCAGTATGAAGTCTTGGAAACCTTAGAGTTCACCTCTGATAGGAAAAGAATGTCAGTAGTGTTGAAAGATTGCCAAAATGGAAAGATCCTTCTCCTGTCAAAAGGAGCAGATGAGGCTATTCTTCCACATGCTCGTGCTGTACCTTATCCTCAAAGTCCAACTTCATTATACTTTTCTTCTTTTCATATGAATTGGCCTGCTGCTGGCTTAGAACCAGTTGAAGTGATTTGA 366 0.4016 KTGDILYKAQSQDEDALVQAAAQLHMVFFNKSGNILEVKFNTSILQYEVLETLEFTSDRKRMSVVLKDCQNGKILLLSKGADEAILPHARAVPYPQSPTSLYFSSFHMNWPAAGLEPVEVI 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme103796g00001 121 Pfam Cation transport ATPase (P-type) 9 89 - -
Trme103796g00001 121 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 5 89 - -
Trme103796g00001 121 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 10 93 IPR023299 GO:0000166
Trme103796g00001 121 Gene3D - 1 102 IPR023299 GO:0000166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme103796g00001 Trme-Chr103796 68 606 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme103796g00001 1 91 Primary Pumps ATPases AT5G44240 78.022 6.59e-45 153
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme103796g00001 K01530 - gmx:100778546 169.474