Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme103471g00001 AGACTGTATGACAGTGGGGCTAGGAATTTTTGGATACATAACACGGGTCCACTGGGATGCTTGGCTCAGAATGTTGCCACATTTGGCGCGGATACATCAAAGCTTGATGAACTAGGATGTCTTCGTGGGCACAACCAAGCTGCTAAAGCCTTTAATCTACATCTGCAAGCTTTCTGCAGTAAATTGAAGGGCCAATATCTAGATGTAAATGTTATATATGTTGATATCTTTACCATAAAATCAAACCTCATTGCAAACTACTCAAAACATGGTTATGCAGCAGCAACTTCTGTTATATTCAAACCTATTATCGCAGTTCAAGGTTTGAACAACCTATTATGGCTTGCTGTGGATATGGAGGTCCACCATTGA 372 0.4059 RLYDSGARNFWIHNTGPLGCLAQNVATFGADTSKLDELGCLRGHNQAAKAFNLHLQAFCSKLKGQYLDVNVIYVDIFTIKSNLIANYSKHGYAAATSVIFKPIIAVQGLNNLLWLAVDMEVHH 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme103471g00001 123 Gene3D SGNH hydrolase 1 111 IPR036514 -
Trme103471g00001 123 Pfam GDSL-like Lipase/Acylhydrolase 1 85 IPR001087 GO:0016788
Trme103471g00001 123 PANTHER ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN 1 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme103471g00001 Trme-Chr103471 120 677 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme103471g00001 2 95 Pollen Coat Proteome AT1G75930 31.250 3.42e-07 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme103471g00001 - - rcu:8285522 155.221