Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme103321g00001 GACCTAAAGTCTTCTAACCTGCTTGTTGATAAAAACTGGAATGTCAAGGTTGGAGACTTTGGCCTTTCGAAGTTGAAGGATGCAACTTTACTGACTACCAAATCCGGGAGAGGCACACCTCAATGGATGGCCCCTGAAGTCCTCCGCAGTGAACCTTCAAATGAAAAGTAA 171 0.4503 DLKSSNLLVDKNWNVKVGDFGLSKLKDATLLTTKSGRGTPQWMAPEVLRSEPSNEK 56
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme103321g00001 56 Gene3D Transferase(Phosphotransferase) domain 1 1 56 - -
Trme103321g00001 56 Pfam Protein kinase domain 1 53 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme103321g00001 56 ProSiteProfiles Protein kinase domain profile. 1 56 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme103321g00001 56 SUPERFAMILY Protein kinase-like (PK-like) 1 53 IPR011009 -
Trme103321g00001 56 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 1 52 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme103321g00001 Trme-Chr103321 2 410 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme103321g00001 1 56 MAP Kinase Kinase Kinase AT4G23050 91.071 1.05e-29 106
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Trme103321g00001 Pkinase 1.5e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme103321g00001 - - gmx:100813707 112.079