Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme10312g00001 ATGTTGCTAGATGGTAGCCGGAATCTAAAGATAGCTGATTTTGGAGTTGCTCGTGTTGAAGCTTTGAATCCAAGTGACATGACCGGTGAAACTGGAACCCTTGGATATATGGCTCCTGAGGTTTTGGATGGAAAACCTTACAACAGGACATGTGATGTCTATAGCTTTGGCATTTGCTTGTGGGAAGTTTATTGCTGTGATATGCCCTATGCAGATCTAAGCTTTGCTGACGTGTCTTCTGCTGTCGTCCGTCAGAATTTACGCCCGGATATTCCAAGGTGTTGTCCGAGTGCATTGGCGAGCATCATGCGGAAATGCTGGGACGCGAATCCGAGCAAACGTCCGGAAATGAGCGATGTGGTGAGAATGCTAGAAGCACTGGATACAAGCAAAGGTGGTGGAATGATACCTGAAGATCAGAGTTCAGGTTGCTTTTGTTTTTCACCGGCTCGCGGTCCTTAA 462 0.4697 MLLDGSRNLKIADFGVARVEALNPSDMTGETGTLGYMAPEVLDGKPYNRTCDVYSFGICLWEVYCCDMPYADLSFADVSSAVVRQNLRPDIPRCCPSALASIMRKCWDANPSKRPEMSDVVRMLEALDTSKGGGMIPEDQSSGCFCFSPARGP 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme10312g00001 153 ProSiteProfiles Protein kinase domain profile. 1 127 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme10312g00001 153 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 2 127 - -
Trme10312g00001 153 SUPERFAMILY Protein kinase-like (PK-like) 2 124 IPR011009 -
Trme10312g00001 153 Gene3D Transferase(Phosphotransferase) domain 1 1 139 - -
Trme10312g00001 153 Pfam Protein tyrosine and serine/threonine kinase 2 124 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme10312g00001 Trme-Chr10312 727 1650 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme10312g00001 1 153 MAP Kinase Kinase Kinase AT4G14780 83.660 4.84e-99 287
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Trme10312g00001 PK_Tyr_Ser-Thr 7e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme10312g00001 - - gmx:100803917 307.375