Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Trme10311g00001 | ATGTTAAGTCTACTTCACCATCCTAACCTTGTCAACCTTATTGGTTATTGTGCTGATGGAGATCAAAGGCTTCTAGTTTATGAATATATGTCATTAGGATCCTTGGAAGACCACTTGCATGATTTATCTCCTAGCAAGAAACGACTTGACTGGAACATGCGGATGAAAATAGCCGCCGGGGCTGCAAAGGGATTGGAGTATCTACACGACAAAGCTAATCCTCCGGTCATATACCGAGATTTGAAATGCTCCAACATTTTGCTTGGCGAAGGGTATCACCCCAAGTTATCTGATTTTGGCTTGGCCAAACTTGGCCCGGTCGGAGAAAACACCCATGTATCRACAAGGGTTATGGGCACCTATGGATATTGTGCTCCAGAGTATGCAATGACCGGTCAACTTACTCTCAAATCAGATGTTTATAGCTTTGGTGTAGTTCTTCTCGAAATAATTACAGGAAGGAAAGCTATTGACAATTCGAAATCTGCGGCAGAGCAGAATCTTGTTGCATGGGCTAGACCGTTGTTCAAAGATCGAAGGAAATTTTCGCAAATGGCTGATCCTATGCTTCAAGGTCAGTATCCTTCGAGAGGGCTATACCAGGCCCTTGCTGTTGCAGCAATGTGTGTTCAAGAACAAGCTAATATGCGTCCGGTTATAGCTGATGTTGTCACAGCTTTGTCTTACCTTGCTTCGCAAAGACATGATCACAATACTCAGACAGTCCAAAACTCTCGCCTCTCTCCTGGTACTCCCTCTAGAGCCCGGAGGGGGCGATAA | 780 | 0.4474 | MLSLLHHPNLVNLIGYCADGDQRLLVYEYMSLGSLEDHLHDLSPSKKRLDWNMRMKIAAGAAKGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGENTHVSTRVMGTYGYCAPEYAMTGQLTLKSDVYSFGVVLLEIITGRKAIDNSKSAAEQNLVAWARPLFKDRRKFSQMADPMLQGQYPSRGLYQALAVAAMCVQEQANMRPVIADVVTALSYLASQRHDHNTQTVQNSRLSPGTPSRARRGR | 259 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Trme10311g00001 | 259 | MobiDBLite | consensus disorder prediction | 235 | 259 | - | - | |
Trme10311g00001 | 259 | Gene3D | Transferase(Phosphotransferase) domain 1 | 31 | 251 | - | - | |
Trme10311g00001 | 259 | Pfam | Protein tyrosine and serine/threonine kinase | 2 | 225 | IPR001245 | GO:0004672|GO:0006468 | |
Trme10311g00001 | 259 | SMART | serkin_6 | 1 | 230 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Trme10311g00001 | 259 | Gene3D | Phosphorylase Kinase; domain 1 | 1 | 30 | - | - | |
Trme10311g00001 | 259 | PANTHER | OS07G0668900 PROTEIN | 1 | 240 | - | - | |
Trme10311g00001 | 259 | PIRSF | ILK | 1 | 245 | - | - | |
Trme10311g00001 | 259 | ProSiteProfiles | Protein kinase domain profile. | 1 | 230 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Trme10311g00001 | 259 | FunFam | Serine/threonine-protein kinase PBS1 | 30 | 245 | - | - | |
Trme10311g00001 | 259 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 76 | 88 | IPR008271 | GO:0004672|GO:0006468 | |
Trme10311g00001 | 259 | SUPERFAMILY | Protein kinase-like (PK-like) | 2 | 227 | IPR011009 | - | |
Trme10311g00001 | 259 | MobiDBLite | consensus disorder prediction | 235 | 251 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Trme10311g00001 | Trme-Chr10311 | 571 | 1605 | Dispersed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Trme10311g00001 | 1 | 232 | Glycoside Hydrolase | AT3G07070 | 70.259 | 6.41e-122 | 352 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_RLCK-VIIa-1 | Trme10311g00001 | PK_Tyr_Ser-Thr | 1.1e-36 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Trme10311g00001 | - | - | gmx:100499648 | 494.197 |