Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme103074g00001 CCTGTTGCACATCATGCTGCTGAAGTGCATTTTGTTGTTAAGGATAGTGATGTGGTAGGTTCACAGCTTATTGGTGTTGTGACGATTCCGGTCGAACAATTATACTCAGGTGAAAAAGTACAAGGGACTTACCCTATTCTTAATAGCAATGGGAAGCCTTGTAAGCAAGGTGCTGTTTTGAGTGTTTCCATTCAGTTCATTCCAATAGAGAAACTGATCATGTATCATCAAGGCGTTGGAGCAGGGCCGGAATATATTGGTGTGCCGGGAACATATTTTCCATTGAGGAAAGGTGGAATTGTTACNNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNNNNCTTGATCATGGGATGCATTATGTTCACGGACAGTGTTGGCGTGATATCTTTGAGGCCATACGTCAGGCGAAGCGTTTGGTTTACATTACTGGGTGGGCAGTGTGGCACAAAGTTAGGTTGATAAGGGACCCTGATAGTCATAGTCATGCTTCAGAATACACGCTTGGTGATCTTCTGAGGTCTAAGTCTCAGGAAGGAGTAAGAGTGCTTCTTCTTGTATGGGATGACCCTACCTCAAGAAGCATTCTTGGTTATAAAACA 615 0.4016 PVAHHAAEVHFVVKDSDVVGSQLIGVVTIPVEQLYSGEKVQGTYPILNSNGKPCKQGAVLSVSIQFIPIEKLIMYHQGVGAGPEYIGVPGTYFPLRKGGIVTXXXXXXXXXXXXXXXXLDHGMHYVHGQCWRDIFEAIRQAKRLVYITGWAVWHKVRLIRDPDSHSHASEYTLGDLLRSKSQEGVRVLLLVWDDPTSRSILGYKT 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme103074g00001 205 Gene3D Endonuclease Chain A 122 203 - -
Trme103074g00001 205 PANTHER PHOSPHOLIPASE D 1 201 IPR015679 -
Trme103074g00001 205 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 5 70 IPR035892 -
Trme103074g00001 205 Gene3D C2 domain 1 70 IPR035892 -
Trme103074g00001 205 SUPERFAMILY Phospholipase D/nuclease 126 198 - -
Trme103074g00001 205 Pfam C2 domain 2 46 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme103074g00001 Trme-Chr103074 3 617 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme103074g00001 1 205 Phospholipase D Gene Family (Wang group) AT2G42010 73.171 1.58e-98 306
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme103074g00001 K01115 - gmx:100801286 311.612