Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme1029g00001 GACATTGGAACAGGTAACAAAGCAACACCTCTTGCATTAGGAGCTGGTCATGTTAATCCTAATAGAGCACTTGACCCTGGTCTTGTTTATGATGTTGGTGTACAAGATTATGTTAATTTTCTTTGTGCACTTAACTTCACACAAAAAATCATCACTGCCATTACAAGATCATCTGTTAATGATTGCTCTAAACCTTCATTAGATCTCAATTACCCTTCTTTTATTGCTTTTTTCAATGCTGGAAATTCTTCAAAGACAACCCAACATTTTCACAGAACAGTTACTAATGTTGGCGAAGGACAAACAGCGTATGTTGCTAGCATTACACCAATTAAAAGGTTTCGTATCAACGTTATCCCAAATAAGTTGGTGTTCAAGAAGAAGAACCAGAAGATAAGCTACAGATTGAGCATTGATGGTCCAAGAATGATACAAAAGAATAAAGTGTCTTTTGGATATCTTACTTGGAAGGATGAGAAGCATGTAGTCAGGAGTCCTATTGTTGTAACCACCCCCAGTTTCAATTTGTAG 531 0.3672 DIGTGNKATPLALGAGHVNPNRALDPGLVYDVGVQDYVNFLCALNFTQKIITAITRSSVNDCSKPSLDLNYPSFIAFFNAGNSSKTTQHFHRTVTNVGEGQTAYVASITPIKRFRINVIPNKLVFKKKNQKISYRLSIDGPRMIQKNKVSFGYLTWKDEKHVVRSPIVVTTPSFNL 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme1029g00001 176 Gene3D Peptidase S8/S53 domain 5 37 IPR036852 GO:0004252|GO:0006508
Trme1029g00001 176 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 8 169 IPR045051 -
Trme1029g00001 176 Pfam Fibronectin type-III domain 68 169 IPR041469 -
Trme1029g00001 176 Gene3D - 41 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme1029g00001 Trme-Chr1029 2 532 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme1029g00001 10 159 Subtilisin-like Serine Gene Family AT5G67090 46.711 4.46e-40 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme1029g00001 - - gmx:100786751 255.758