Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme102756g00001 GAGTTTGAGCTCCACAGAGATCTTCTAGAACTGATGACTTGCGGACATAGAAACATTCTGCAGTTCTGTGGTATTTGTGTGGATGATAATCATGGGTTATGTGTGGTGACTAAGTTCATGGTACGTGGGTCGGTCCATGACTTAATGCTAAAGAACAAGAAGCTTCAGAGTAAGGATGTTGTTAGAATCGCGGTTGATGTAGCTGAGGGGATCAAGTTTATGAATGACCATGGTGTTGCATATAGAGACCTTAATACACAGAGGATTCTATTAGATAGGCATGGTAATGCTTGCTTGGGAGATATGGGTGTAGTCACTGCCTGCAAGAGTGTTGGTGAAGCAACGGAGTATGAAACTGATGGTTATAGGTGGCTAGCTCCTGAGGTTTGCTTCTATTAA 399 0.4286 EFELHRDLLELMTCGHRNILQFCGICVDDNHGLCVVTKFMVRGSVHDLMLKNKKLQSKDVVRIAVDVAEGIKFMNDHGVAYRDLNTQRILLDRHGNACLGDMGVVTACKSVGEATEYETDGYRWLAPEVCFY 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme102756g00001 132 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 11 130 - -
Trme102756g00001 132 Gene3D Transferase(Phosphotransferase) domain 1 1 132 - -
Trme102756g00001 132 Pfam Protein tyrosine and serine/threonine kinase 8 131 IPR001245 GO:0004672|GO:0006468
Trme102756g00001 132 ProSiteProfiles Protein kinase domain profile. 1 132 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme102756g00001 132 SUPERFAMILY Protein kinase-like (PK-like) 4 131 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme102756g00001 Trme-Chr102756 1 399 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme102756g00001 3 129 MAP Kinase Kinase Kinase AT2G17700 37.692 1.11e-24 95.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-7 Trme102756g00001 PK_Tyr_Ser-Thr 8.4e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme102756g00001 - - pvu:PHAVU_008G258400g 258.07