Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme102731g00001 ATGGTGGCTCTAATATGGGCACTGTCCCTATTACTCAATCATCCACTAGAACTTAAAAAGGCACAGGATGAGTTGAACACTCATATTGGGAAGGACAGGAAAGTGGAAGAATCTGACATAAAGAACTTAGTCTACCTCCAAGCCATTGTCAAGGAAACGCTGCGCCTCTATCCACCAAGTCCAATTATCACCTTGCGCGCAGCAATGAATGACTGCACTTTTTCATGTGGCTATCACATTCCTGCTGGTACACAGTTGATGGTGAATACTTGGAAGATCCACAGGGACAGTCGTGTTTGGACTGATCCTCATGATTTCAAGCCTGAGAGGTTTTTAACAAGCTACAAAGATGTTGATGTAAGAAGTCAAAACTATGAGCTTGTCCCTTTTGGTTCTGGAAGGAGAGTATGCCCTGGGGCCTCACTGGCTATGAGAGTGGTGCACTTGACATTGGCTAGATTGCTACACTCTTTCAATGTTGCTACTCCTTCAAATCAAGCTGTAGATATGACAGAAAGCCCTGGACTCACTAATTTAAAAGCAACCCCACTTGAAGTTGTATTAACACCGCGCCTAGATACCAATCTTTATGAGTAG 597 0.4372 MVALIWALSLLLNHPLELKKAQDELNTHIGKDRKVEESDIKNLVYLQAIVKETLRLYPPSPIITLRAAMNDCTFSCGYHIPAGTQLMVNTWKIHRDSRVWTDPHDFKPERFLTSYKDVDVRSQNYELVPFGSGRRVCPGASLAMRVVHLTLARLLHSFNVATPSNQAVDMTESPGLTNLKATPLEVVLTPRLDTNLYE 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme102731g00001 198 PRINTS P450 superfamily signature 48 59 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme102731g00001 198 PRINTS P450 superfamily signature 13 26 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme102731g00001 198 PRINTS P450 superfamily signature 128 137 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme102731g00001 198 PRINTS P450 superfamily signature 137 148 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme102731g00001 198 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 130 139 IPR017972 GO:0005506|GO:0016705
Trme102731g00001 198 SUPERFAMILY Cytochrome P450 2 191 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme102731g00001 198 PRINTS E-class P450 group I signature 127 137 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme102731g00001 198 PRINTS E-class P450 group I signature 47 65 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme102731g00001 198 PRINTS E-class P450 group I signature 4 30 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme102731g00001 198 PRINTS E-class P450 group I signature 89 113 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme102731g00001 198 PRINTS E-class P450 group I signature 137 160 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme102731g00001 198 PANTHER CYTOCHROME P450 82C3-RELATED 2 197 - -
Trme102731g00001 198 Pfam Cytochrome P450 3 177 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme102731g00001 198 Gene3D Cytochrome P450 1 196 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme102731g00001 Trme-Chr102731 54 650 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme102731g00001 4 197 Cytochrome P450 AT4G31950 62.564 8.07e-86 260
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme102731g00001 - - vvo:131650056 369.777