Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme10251g00001 TTTGATTTGATTTACTTAATGCTTGACAAGGCTGATGAACAGACTGACAGACGACTTGCCAAACATATTGTTTCCCTACACTTTAAGGATTATGAGAACATGGAGCACGATGTGTTGGACCTTTCTACACTAACTGATTATGTTAGCTATGCCCGAAAGCACATACACCCACAGCTATCAGATGAAGCTGCTGATGAATTGATTACAGGCTATGTAAAAATAAGGGGTAGGGGAAAATTTACCGGAAGTAGCAAAAAGGTAATAACAGCAACTCCAAGGCAGATTGAGAGTCTATTGCGCCTTAGTGAAGCATTGGCTCGGATTCGCTTCTCAGAATGGGTCGAAAAGCATGATGTAGTGGAGGCATTTCGGCTTCTGGAAGTTGCGATGCAGCAGTCTGCAATGGATATCAGAACTGGAACTATTGACATGGATCTTATTACTACTGGAGTTTCGTCAAGCGAAAGGATGAGACGAGAAAGTTTGATTCAAGATACTCGCAATTTAATCATGGAGAAGATGCAAATTGGGGGACGTTCCATGCGGTTATTGGAGATATTAGAAGAATTGAAGAATCAGAGCCCTGGCAGCGAAATTCATCTTAATGAT 609 0.4154 FDLIYLMLDKADEQTDRRLAKHIVSLHFKDYENMEHDVLDLSTLTDYVSYARKHIHPQLSDEAADELITGYVKIRGRGKFTGSSKKVITATPRQIESLLRLSEALARIRFSEWVEKHDVVEAFRLLEVAMQQSAMDIRTGTIDMDLITTGVSSSERMRRESLIQDTRNLIMEKMQIGGRSMRLLEILEELKNQSPGSEIHLND 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme10251g00001 203 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 133 IPR027417 -
Trme10251g00001 203 Gene3D - 1 135 IPR027417 -
Trme10251g00001 203 Pfam MCM AAA-lid domain 43 129 IPR041562 -
Trme10251g00001 203 PANTHER DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER 1 173 IPR031327 GO:0003677|GO:0005524|GO:0032508
Trme10251g00001 203 Gene3D - 136 200 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme10251g00001 Trme-Chr10251 259 1333 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme10251g00001 1 203 Core DNA Replication Machinery Family AT2G16440 71.707 3.58e-97 298
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme10251g00001 K02212 - gmx:100782586 338.961