Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Trme1025108g00001 | ATGACTGAGTATGTTGTCACGAGATGGTACCGAGCCCCCGAATTGCTCCTCAATTGTTCTGAGTACACTTCTGCAATCGATGTTTGGTCTGTTGGTTGCATATTTGGAGAAATTATGACCAGAGAGCCCTTGTTTCCTGGCAAAGACTATGTTCATCAATTAAGGCTTATCACAGAG | 177 | 0.435 | MTEYVVTRWYRAPELLLNCSEYTSAIDVWSVGCIFGEIMTREPLFPGKDYVHQLRLITE | 59 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Trme1025108g00001 | 59 | Pfam | Protein kinase domain | 1 | 50 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Trme1025108g00001 | 59 | Gene3D | Transferase(Phosphotransferase) domain 1 | 6 | 59 | - | - | |
Trme1025108g00001 | 59 | PANTHER | MITOGEN-ACTIVATED PROTEIN KINASE | 1 | 59 | - | - | |
Trme1025108g00001 | 59 | ProSiteProfiles | Protein kinase domain profile. | 1 | 59 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Trme1025108g00001 | 59 | SUPERFAMILY | Protein kinase-like (PK-like) | 1 | 59 | IPR011009 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Trme1025108g00001 | Trme-Chr1025108 | 8 | 184 | Dispersed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Trme1025108g00001 | 1 | 59 | MAP Kinase Gene Family | AT1G01560 | 91.525 | 4.88e-39 | 127 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | CMGC_MAPK | Trme1025108g00001 | Pkinase | 3.7e-15 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Trme1025108g00001 | K20600 | - | tpra:123916746 | 127.872 |