Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme1025108g00001 ATGACTGAGTATGTTGTCACGAGATGGTACCGAGCCCCCGAATTGCTCCTCAATTGTTCTGAGTACACTTCTGCAATCGATGTTTGGTCTGTTGGTTGCATATTTGGAGAAATTATGACCAGAGAGCCCTTGTTTCCTGGCAAAGACTATGTTCATCAATTAAGGCTTATCACAGAG 177 0.435 MTEYVVTRWYRAPELLLNCSEYTSAIDVWSVGCIFGEIMTREPLFPGKDYVHQLRLITE 59
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme1025108g00001 59 Pfam Protein kinase domain 1 50 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme1025108g00001 59 Gene3D Transferase(Phosphotransferase) domain 1 6 59 - -
Trme1025108g00001 59 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 1 59 - -
Trme1025108g00001 59 ProSiteProfiles Protein kinase domain profile. 1 59 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme1025108g00001 59 SUPERFAMILY Protein kinase-like (PK-like) 1 59 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme1025108g00001 Trme-Chr1025108 8 184 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme1025108g00001 1 59 MAP Kinase Gene Family AT1G01560 91.525 4.88e-39 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Trme1025108g00001 Pkinase 3.7e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme1025108g00001 K20600 - tpra:123916746 127.872