Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme1024673g00001 ATGCCGGTAACTGATTACGACATCGTGATTGATGCGTTACCGTCGGCGACGATTAACGATCTTCACGAAATCGCGAAGCGAATGGTTGCCGGTGGATTTGGTAAAGAGTGTTCTCACGTGTACAGCAGTTGTAGAAGAGAGTTCTTGGAGGAA 153 0.4771 MPVTDYDIVIDALPSATINDLHEIAKRMVAGGFGKECSHVYSSCRREFLEE 51
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme1024673g00001 51 Gene3D Exocyst complex component Exo70 2 51 - -
Trme1024673g00001 51 PANTHER EXOCYST COMPLEX PROTEIN EXO70 8 51 IPR004140 GO:0000145|GO:0006887
Trme1024673g00001 51 SUPERFAMILY Cullin repeat-like 4 51 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme1024673g00001 Trme-Chr1024673 1 153 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme1024673g00001 2 51 EXO70 exocyst subunit family AT5G58430 84.000 1.81e-27 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme1024673g00001 K07195 - lja:Lj2g3v2364700.1 104.375