Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme102433g00001 TTGCAGCAATGGTTCGAGTATTGCACATCGAAGAAGCATACTTGCCCCGTTTGTAAGCAAGGTTGCAAGGCGAAAGATGCGTGTCGGCTTTATTTTCAATCGATTGGAGATGTGAAGGAATCTGTTGTTACTCAGAAGCAAGCTGGTGTTGAAGAAGATGCCGGTGTTTTGCGAAAGGAAGTTAAGAGATTGGAGGGTAAAGTTTCTGGGCTTAGTACTGTTTTGGAAAAACAAACTAAGGAGTTAGATGAACTTAAAGATGAGGTATTTTTTAATTTCTATAATCTGTTTTTGCTTTTGTTTAGCTTAATTTGA 315 0.3841 MQQWFEYCTSKKHTCPVCKQGCKAKDACRLYFQSIGDVKESVVTQKQAGVEEDAGVLRKEVKRLEGKVSGLSTVLEKQTKELDELKDEVFFNFYNLFLLLFSLI 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme102433g00001 104 Coils Coil 68 88 - -
Trme102433g00001 104 PANTHER RING ZINC FINGER PROTEIN-RELATED 1 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme102433g00001 Trme-Chr102433 128 442 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme102433g00001 1 90 C3H Transcription Factor Family AT4G01270 53.846 7.27e-28 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme102433g00001 K11985 - gmx:100812811 123.635