Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme102126g00001 GGTCACATAAACCCAGCAGTGACATTTGGGCTATTTTTGGCAAGAAAATTGTCCTTGACAAGGGCACTATTCTACATGGTGATGCAAGTGTTGGGTGCTATTTGTGGTGCTGGTGTAGTGAAAGGTTTTGAAGGTAAAAAAAGATATGGAGATTTGAACGGTGGTGCCAACTTTGTTGCTCCTGGTTACACTAAAGGTGATGGTCTTGGTGCTGAAATTGTTGGCACTTTCATTCTTGTTTACACCGTTTTCTCAGCCACTGATGCTAAACGTAGCGCCAGAGATTCCCATGTCCCTGTAAGTCCCCTCCTTAAAATAAATAATTAA 327 0.422 GHINPAVTFGLFLARKLSLTRALFYMVMQVLGAICGAGVVKGFEGKKRYGDLNGGANFVAPGYTKGDGLGAEIVGTFILVYTVFSATDAKRSARDSHVPVSPLLKINN 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme102126g00001 108 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 1 106 IPR034294 -
Trme102126g00001 108 ProSitePatterns MIP family signature. 2 10 IPR022357 -
Trme102126g00001 108 SUPERFAMILY Aquaporin-like 1 99 IPR023271 -
Trme102126g00001 108 Pfam Major intrinsic protein 1 99 IPR000425 GO:0015267|GO:0016020|GO:0055085
Trme102126g00001 108 Gene3D Glycerol uptake facilitator protein. 1 106 IPR023271 -
Trme102126g00001 108 PRINTS Major intrinsic protein family signature 71 89 IPR000425 GO:0015267|GO:0016020|GO:0055085
Trme102126g00001 108 PRINTS Major intrinsic protein family signature 21 40 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme102126g00001 Trme-Chr102126 166 492 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme102126g00001 1 104 Major Intrinsic Protein MIP AT4G00430 82.857 5.24e-55 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme102126g00001 K09872 - gmx:100780145 189.504