Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme102073g00001 GAACACATTAAGAATATCAGCACTAAATTTGTTTTCCAGTTGATGAAGAATGAACAATCTCGGCTTTCCATTGAAGCACATGAGTGTGTCGATTCAATCCCTGAATTAAATAAGATGGTTTTTGCAGTTCAGGAATTGGTTAAGCAGTGTGAAGATCTTAAAGTGAAATACTATGAAGAGATGACCCAGAGAAAGAAGCTCTTCAATGAAGTTCAAGAGGCTAAAGGGAACATTCGAGTTTTCTGCCGTTGTCGACCATTGAATAAGGGTGAAATGTCAGCTGGGTGTACAACAGTTGTGGATTTCGATGCATCAAAGGATGGATGCCTTGGAATTTTGACAACTGGCTCCACCAAAAAA 360 0.3917 EHIKNISTKFVFQLMKNEQSRLSIEAHECVDSIPELNKMVFAVQELVKQCEDLKVKYYEEMTQRKKLFNEVQEAKGNIRVFCRCRPLNKGEMSAGCTTVVDFDASKDGCLGILTTGSTKK 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme102073g00001 120 Gene3D Kinesin motor domain 19 118 IPR036961 -
Trme102073g00001 120 Pfam Microtubule binding 58 100 IPR031852 GO:0008017
Trme102073g00001 120 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 35 105 IPR027417 -
Trme102073g00001 120 ProSiteProfiles Kinesin motor domain profile. 77 120 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trme102073g00001 120 PANTHER KINESIN-LIKE PROTEIN KLP-3 10 117 IPR027640 GO:0003777|GO:0007018
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme102073g00001 Trme-Chr102073 86 684 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme102073g00001 49 102 Calmodulin-binding Proteins AT5G65930 43.103 5.58e-09 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme102073g00001 K10406 - gmx:100800016 191.815