Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme102044g00001 ATGATACCACACAAGACAAAGCGTGGAGAGGCTGCACTGGCCCGATTGAAGGTTTATGAGGGTATCCCCCCACCATATGACAAGATCAAGAGGATGGTGGTTCCTGATGCTCTTAAGGTGTTGAGGCTTCAAAAGGGTCACAAATACTGCTTGCTCGGACAATTGTCATCTGAAGTTGGATGGAACTACTATGACACCATC 201 0.4726 MIPHKTKRGEAALARLKVYEGIPPPYDKIKRMVVPDALKVLRLQKGHKYCLLGQLSSEVGWNYYDTI 67
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme102044g00001 67 PANTHER RIBOSOMAL PROTEIN L13 1 67 IPR005822 GO:0003735|GO:0005840|GO:0006412
Trme102044g00001 67 SUPERFAMILY Ribosomal protein L13 1 63 IPR036899 GO:0003735|GO:0005840|GO:0006412
Trme102044g00001 67 Gene3D Ribosomal protein L13 1 63 IPR036899 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme102044g00001 Trme-Chr102044 396 684 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme102044g00001 1 67 Cytoplasmic Ribosomal Protein Gene Family AT4G13170 91.045 4.27e-42 133
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme102044g00001 K02872 - gmx:100813340 137.887